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Cluster: HRGMv2_4628_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4628_11 HRGMv2_4628_11_89 102062 104212 + 1.B.14.1.4
pfam HRGMv2_4628_11 HRGMv2_4628_11_90 104583 105056 - GreA_GreB | GreA_GreB_N
CAZyme HRGMv2_4628_11 HRGMv2_4628_11_91 105611 106720 + GH23
pfam HRGMv2_4628_11 HRGMv2_4628_11_92 106804 107187 - SCP2
pfam HRGMv2_4628_11 HRGMv2_4628_11_93 107413 108321 - ATP_bind_3
CAZyme HRGMv2_4628_11 HRGMv2_4628_11_94 108815 109711 + GH23
TC HRGMv2_4628_11 HRGMv2_4628_11_95 110027 110932 + 9.B.1.1.6
Gene ID: HRGMv2_4628_11_89
Type: TC
Location: 102062 - 104212 (+)
Gene ID: HRGMv2_4628_11_90
Type: pfam
Location: 104583 - 105056 (-)
Gene ID: HRGMv2_4628_11_91
Type: CAZyme
Location: 105611 - 106720 (+)
Gene ID: HRGMv2_4628_11_92
Type: pfam
Location: 106804 - 107187 (-)
Gene ID: HRGMv2_4628_11_93
Type: pfam
Location: 107413 - 108321 (-)
Gene ID: HRGMv2_4628_11_94
Type: CAZyme
Location: 108815 - 109711 (+)
Gene ID: HRGMv2_4628_11_95
Type: TC
Location: 110027 - 110932 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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