Cluster: HRGMv2_4628_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4628
- CGC Family ID: CGCFAM_00359
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4628_7 | HRGMv2_4628_7_54 | 59496 | 62774 | + | GH23 |
| TC | HRGMv2_4628_7 | HRGMv2_4628_7_55 | 62847 | 64697 | + | 3.A.1.5.21 |
| TC | HRGMv2_4628_7 | HRGMv2_4628_7_56 | 64803 | 65873 | + | 3.A.1.5.24 |
| TC | HRGMv2_4628_7 | HRGMv2_4628_7_57 | 65873 | 66889 | + | 3.A.1.5.21 |
| TC | HRGMv2_4628_7 | HRGMv2_4628_7_58 | 66861 | 68456 | + | 3.A.1.5.21 |
| pfam | HRGMv2_4628_7 | HRGMv2_4628_7_59 | 68589 | 69833 | + | Oxidored_FMN |
| TC | HRGMv2_4628_7 | HRGMv2_4628_7_60 | 70284 | 71510 | - | 2.A.1.11.2 |
Gene ID: HRGMv2_4628_7_54
Type: CAZyme
Location: 59496 - 62774 (+)
Type: CAZyme
Location: 59496 - 62774 (+)
Gene ID: HRGMv2_4628_7_55
Type: TC
Location: 62847 - 64697 (+)
Type: TC
Location: 62847 - 64697 (+)
Gene ID: HRGMv2_4628_7_56
Type: TC
Location: 64803 - 65873 (+)
Type: TC
Location: 64803 - 65873 (+)
Gene ID: HRGMv2_4628_7_57
Type: TC
Location: 65873 - 66889 (+)
Type: TC
Location: 65873 - 66889 (+)
Gene ID: HRGMv2_4628_7_58
Type: TC
Location: 66861 - 68456 (+)
Type: TC
Location: 66861 - 68456 (+)
Gene ID: HRGMv2_4628_7_59
Type: pfam
Location: 68589 - 69833 (+)
Type: pfam
Location: 68589 - 69833 (+)
Gene ID: HRGMv2_4628_7_60
Type: TC
Location: 70284 - 71510 (-)
Type: TC
Location: 70284 - 71510 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter guillouiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.