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Cluster: HRGMv2_4628_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4628_5 HRGMv2_4628_5_131 132703 133917 - 2.A.1.71.1
STP HRGMv2_4628_5 HRGMv2_4628_5_132 134061 134654 + TetR_N
pfam HRGMv2_4628_5 HRGMv2_4628_5_133 134690 135334 - Lipase_GDSL | Lipase_GDSL_2 | OSK
TC HRGMv2_4628_5 HRGMv2_4628_5_134 135347 136099 + 3.A.1.122.15
TC HRGMv2_4628_5 HRGMv2_4628_5_135 136099 138693 + 3.A.1.122.15
TC HRGMv2_4628_5 HRGMv2_4628_5_136 138871 139680 - 9.B.104.1.3
CAZyme HRGMv2_4628_5 HRGMv2_4628_5_137 139754 140428 + GT51
pfam HRGMv2_4628_5 HRGMv2_4628_5_138 140560 142644 + PP_kinase | PP_kinase_N | PP_kinase_C | PP_kinase_C_1
TC HRGMv2_4628_5 HRGMv2_4628_5_139 142805 144019 - 2.A.1.2.38
Gene ID: HRGMv2_4628_5_131
Type: TC
Location: 132703 - 133917 (-)
Gene ID: HRGMv2_4628_5_132
Type: STP
Location: 134061 - 134654 (+)
Gene ID: HRGMv2_4628_5_133
Type: pfam
Location: 134690 - 135334 (-)
Gene ID: HRGMv2_4628_5_134
Type: TC
Location: 135347 - 136099 (+)
Gene ID: HRGMv2_4628_5_135
Type: TC
Location: 136099 - 138693 (+)
Gene ID: HRGMv2_4628_5_136
Type: TC
Location: 138871 - 139680 (-)
Gene ID: HRGMv2_4628_5_137
Type: CAZyme
Location: 139754 - 140428 (+)
Gene ID: HRGMv2_4628_5_138
Type: pfam
Location: 140560 - 142644 (+)
Gene ID: HRGMv2_4628_5_139
Type: TC
Location: 142805 - 144019 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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