Cluster: HRGMv2_4628_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4628
- CGC Family ID: CGCFAM_05534
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4628_30 | HRGMv2_4628_30_35 | 35467 | 36480 | + | 9.B.10.1.1 |
| pfam | HRGMv2_4628_30 | HRGMv2_4628_30_36 | 36537 | 37067 | + | YaeQ |
| TC | HRGMv2_4628_30 | HRGMv2_4628_30_37 | 37175 | 37798 | + | 9.B.20.1.3 |
| pfam | HRGMv2_4628_30 | HRGMv2_4628_30_38 | 37900 | 39159 | + | DUF2252 |
| pfam | HRGMv2_4628_30 | HRGMv2_4628_30_39 | 39176 | 39514 | + | FKBP_C |
| CAZyme | HRGMv2_4628_30 | HRGMv2_4628_30_40 | 40001 | 42034 | + | CE4 | GH153 |
| CAZyme | HRGMv2_4628_30 | HRGMv2_4628_30_41 | 42043 | 43308 | + | GT2 |
Gene ID: HRGMv2_4628_30_35
Type: TC
Location: 35467 - 36480 (+)
Type: TC
Location: 35467 - 36480 (+)
Gene ID: HRGMv2_4628_30_36
Type: pfam
Location: 36537 - 37067 (+)
Type: pfam
Location: 36537 - 37067 (+)
Gene ID: HRGMv2_4628_30_37
Type: TC
Location: 37175 - 37798 (+)
Type: TC
Location: 37175 - 37798 (+)
Gene ID: HRGMv2_4628_30_38
Type: pfam
Location: 37900 - 39159 (+)
Type: pfam
Location: 37900 - 39159 (+)
Gene ID: HRGMv2_4628_30_39
Type: pfam
Location: 39176 - 39514 (+)
Type: pfam
Location: 39176 - 39514 (+)
Gene ID: HRGMv2_4628_30_40
Type: CAZyme
Location: 40001 - 42034 (+)
Type: CAZyme
Location: 40001 - 42034 (+)
Gene ID: HRGMv2_4628_30_41
Type: CAZyme
Location: 42043 - 43308 (+)
Type: CAZyme
Location: 42043 - 43308 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter guillouiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.