Cluster: HRGMv2_4628_CGC20
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4628
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_23 | 17935 | 18354 | - | 3.A.2.1.1 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_24 | 18382 | 19776 | - | 3.A.2.1.1 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_25 | 19803 | 20672 | - | 3.A.2.1.1 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_26 | 20761 | 22305 | - | 3.A.2.1.1 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_27 | 22366 | 22902 | - | 3.A.2.1.1 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_28 | 22914 | 23384 | - | 3.A.2.1.1 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_29 | 23424 | 23669 | - | 3.A.2.1.1 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_30 | 23753 | 24628 | - | 3.A.2.1.1 |
| pfam | HRGMv2_4628_29 | HRGMv2_4628_29_31 | 24732 | 25130 | - | ATP-synt_I |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_32 | 25302 | 26144 | - | 3.A.1.15.5 |
| TF | HRGMv2_4628_29 | HRGMv2_4628_29_33 | 26283 | 26780 | + | FUR |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_34 | 26753 | 27553 | + | 3.A.1.15.5 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_35 | 27557 | 28357 | + | 3.A.1.15.5 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_36 | 28391 | 29011 | - | 2.A.76.1.5 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_37 | 29084 | 29704 | - | 2.A.76.1.1 |
| pfam | HRGMv2_4628_29 | HRGMv2_4628_29_38 | 29867 | 30787 | + | Dyp_perox_N | Dyp_perox_C |
| NULL(UNKNOWN) | HRGMv2_4628_29 | HRGMv2_4628_29_39 | 30877 | 31758 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4628_29 | HRGMv2_4628_29_40 | 31767 | 34022 | - | CBM50 |
| TC | HRGMv2_4628_29 | HRGMv2_4628_29_41 | 34026 | 37343 | - | 3.A.23.1.1 |
Gene ID: HRGMv2_4628_29_23
Type: TC
Location: 17935 - 18354 (-)
Type: TC
Location: 17935 - 18354 (-)
Gene ID: HRGMv2_4628_29_24
Type: TC
Location: 18382 - 19776 (-)
Type: TC
Location: 18382 - 19776 (-)
Gene ID: HRGMv2_4628_29_25
Type: TC
Location: 19803 - 20672 (-)
Type: TC
Location: 19803 - 20672 (-)
Gene ID: HRGMv2_4628_29_26
Type: TC
Location: 20761 - 22305 (-)
Type: TC
Location: 20761 - 22305 (-)
Gene ID: HRGMv2_4628_29_27
Type: TC
Location: 22366 - 22902 (-)
Type: TC
Location: 22366 - 22902 (-)
Gene ID: HRGMv2_4628_29_28
Type: TC
Location: 22914 - 23384 (-)
Type: TC
Location: 22914 - 23384 (-)
Gene ID: HRGMv2_4628_29_29
Type: TC
Location: 23424 - 23669 (-)
Type: TC
Location: 23424 - 23669 (-)
Gene ID: HRGMv2_4628_29_30
Type: TC
Location: 23753 - 24628 (-)
Type: TC
Location: 23753 - 24628 (-)
Gene ID: HRGMv2_4628_29_31
Type: pfam
Location: 24732 - 25130 (-)
Type: pfam
Location: 24732 - 25130 (-)
Gene ID: HRGMv2_4628_29_32
Type: TC
Location: 25302 - 26144 (-)
Type: TC
Location: 25302 - 26144 (-)
Gene ID: HRGMv2_4628_29_33
Type: TF
Location: 26283 - 26780 (+)
Type: TF
Location: 26283 - 26780 (+)
Gene ID: HRGMv2_4628_29_34
Type: TC
Location: 26753 - 27553 (+)
Type: TC
Location: 26753 - 27553 (+)
Gene ID: HRGMv2_4628_29_35
Type: TC
Location: 27557 - 28357 (+)
Type: TC
Location: 27557 - 28357 (+)
Gene ID: HRGMv2_4628_29_36
Type: TC
Location: 28391 - 29011 (-)
Type: TC
Location: 28391 - 29011 (-)
Gene ID: HRGMv2_4628_29_37
Type: TC
Location: 29084 - 29704 (-)
Type: TC
Location: 29084 - 29704 (-)
Gene ID: HRGMv2_4628_29_38
Type: pfam
Location: 29867 - 30787 (+)
Type: pfam
Location: 29867 - 30787 (+)
Gene ID: HRGMv2_4628_29_39
Type:
Location: 30877 - 31758 (-)
Type:
Location: 30877 - 31758 (-)
Gene ID: HRGMv2_4628_29_40
Type: CAZyme
Location: 31767 - 34022 (-)
Type: CAZyme
Location: 31767 - 34022 (-)
Gene ID: HRGMv2_4628_29_41
Type: TC
Location: 34026 - 37343 (-)
Type: TC
Location: 34026 - 37343 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter guillouiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.