dbCAN HGM

Cluster: HRGMv2_4628_CGC2

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_4628_1	HRGMv2_4628_1_134	153570	154328	+	GT25
CAZyme	HRGMv2_4628_1	HRGMv2_4628_1_135	154433	155347	+	GT32
CAZyme	HRGMv2_4628_1	HRGMv2_4628_1_136	155422	156201	+	GT25
CAZyme	HRGMv2_4628_1	HRGMv2_4628_1_137	156214	156987	+	GT25
CAZyme	HRGMv2_4628_1	HRGMv2_4628_1_138	157081	157875	+	GT25
TC	HRGMv2_4628_1	HRGMv2_4628_1_139	158412	160349	-	9.B.97.5.1
CAZyme	HRGMv2_4628_1	HRGMv2_4628_1_140	160387	161304	-	GT73
pfam	HRGMv2_4628_1	HRGMv2_4628_1_141	161358	162263	-	Glyco_transf_8
CAZyme	HRGMv2_4628_1	HRGMv2_4628_1_142	162405	163211	+	GT25

Gene ID: HRGMv2_4628_1_134
Type: CAZyme
Location: 153570 - 154328 (+)

Gene ID: HRGMv2_4628_1_135
Type: CAZyme
Location: 154433 - 155347 (+)

Gene ID: HRGMv2_4628_1_136
Type: CAZyme
Location: 155422 - 156201 (+)

Gene ID: HRGMv2_4628_1_137
Type: CAZyme
Location: 156214 - 156987 (+)

Gene ID: HRGMv2_4628_1_138
Type: CAZyme
Location: 157081 - 157875 (+)

Gene ID: HRGMv2_4628_1_139
Type: TC
Location: 158412 - 160349 (-)

Gene ID: HRGMv2_4628_1_140
Type: CAZyme
Location: 160387 - 161304 (-)

Gene ID: HRGMv2_4628_1_141
Type: pfam
Location: 161358 - 162263 (-)

Gene ID: HRGMv2_4628_1_142
Type: CAZyme
Location: 162405 - 163211 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.