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Cluster: HRGMv2_4628_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4628_21 HRGMv2_4628_21_13 14032 14571 - 9.B.105.1.1
pfam HRGMv2_4628_21 HRGMv2_4628_21_14 14564 17404 - tRNA-synt_1 | tRNA-synt_1e | zf-FPG_IleRS | Anticodon_1 | tRNA-synt_1g
pfam HRGMv2_4628_21 HRGMv2_4628_21_15 17466 18467 - CTP_transf_like | Flavokinase | FAD_syn
TC HRGMv2_4628_21 HRGMv2_4628_21_16 18675 19805 + 2.A.16.4.3
STP HRGMv2_4628_21 HRGMv2_4628_21_17 19987 20703 + NTP_transf_2
TC HRGMv2_4628_21 HRGMv2_4628_21_18 20753 22054 - 2.A.40.1.3
NULL(UNKNOWN) HRGMv2_4628_21 HRGMv2_4628_21_19 22426 22881 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4628_21 HRGMv2_4628_21_20 22894 24198 - CBM50 | CBM50
Gene ID: HRGMv2_4628_21_13
Type: TC
Location: 14032 - 14571 (-)
Gene ID: HRGMv2_4628_21_14
Type: pfam
Location: 14564 - 17404 (-)
Gene ID: HRGMv2_4628_21_15
Type: pfam
Location: 17466 - 18467 (-)
Gene ID: HRGMv2_4628_21_16
Type: TC
Location: 18675 - 19805 (+)
Gene ID: HRGMv2_4628_21_17
Type: STP
Location: 19987 - 20703 (+)
Gene ID: HRGMv2_4628_21_18
Type: TC
Location: 20753 - 22054 (-)
Gene ID: HRGMv2_4628_21_19
Type:
Location: 22426 - 22881 (-)
Gene ID: HRGMv2_4628_21_20
Type: CAZyme
Location: 22894 - 24198 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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