Cluster: HRGMv2_4628_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4628
- CGC Family ID: CGCFAM_08527
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4628_13 | HRGMv2_4628_13_79 | 74676 | 75434 | - | GH25 |
| TC | HRGMv2_4628_13 | HRGMv2_4628_13_80 | 75514 | 76905 | - | 2.A.1.3.26 |
| pfam | HRGMv2_4628_13 | HRGMv2_4628_13_81 | 77107 | 78936 | + | choice_anch_I | choice_anch_I |
| pfam | HRGMv2_4628_13 | HRGMv2_4628_13_82 | 79092 | 79763 | - | TENA_THI-4 |
| TC | HRGMv2_4628_13 | HRGMv2_4628_13_83 | 79995 | 81080 | + | 2.A.109.3.1 |
| TC | HRGMv2_4628_13 | HRGMv2_4628_13_84 | 81223 | 82584 | + | 2.A.1.2.60 |
Gene ID: HRGMv2_4628_13_79
Type: CAZyme
Location: 74676 - 75434 (-)
Type: CAZyme
Location: 74676 - 75434 (-)
Gene ID: HRGMv2_4628_13_80
Type: TC
Location: 75514 - 76905 (-)
Type: TC
Location: 75514 - 76905 (-)
Gene ID: HRGMv2_4628_13_81
Type: pfam
Location: 77107 - 78936 (+)
Type: pfam
Location: 77107 - 78936 (+)
Gene ID: HRGMv2_4628_13_82
Type: pfam
Location: 79092 - 79763 (-)
Type: pfam
Location: 79092 - 79763 (-)
Gene ID: HRGMv2_4628_13_83
Type: TC
Location: 79995 - 81080 (+)
Type: TC
Location: 79995 - 81080 (+)
Gene ID: HRGMv2_4628_13_84
Type: TC
Location: 81223 - 82584 (+)
Type: TC
Location: 81223 - 82584 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter guillouiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.