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Cluster: HRGMv2_4622_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4622_28 HRGMv2_4622_28_8 8381 9058 - 1.C.113.1.4
pfam HRGMv2_4622_28 HRGMv2_4622_28_9 9191 10000 + Prenyltransf
CAZyme HRGMv2_4622_28 HRGMv2_4622_28_10 10203 11138 - CE14
pfam HRGMv2_4622_28 HRGMv2_4622_28_11 11197 11697 + GreA_GreB | GreA_GreB_N
NULL(UNKNOWN) HRGMv2_4622_28 HRGMv2_4622_28_12 12059 13030 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4622_28 HRGMv2_4622_28_13 13092 14510 - 2.A.86.1.6
pfam HRGMv2_4622_28 HRGMv2_4622_28_14 14695 15384 + UDG
pfam HRGMv2_4622_28 HRGMv2_4622_28_15 15512 16048 - Flavodoxin_2 | FMN_red
TC HRGMv2_4622_28 HRGMv2_4622_28_16 16504 17319 - 3.A.1.16.2
Gene ID: HRGMv2_4622_28_8
Type: TC
Location: 8381 - 9058 (-)
Gene ID: HRGMv2_4622_28_9
Type: pfam
Location: 9191 - 10000 (+)
Gene ID: HRGMv2_4622_28_10
Type: CAZyme
Location: 10203 - 11138 (-)
Gene ID: HRGMv2_4622_28_11
Type: pfam
Location: 11197 - 11697 (+)
Gene ID: HRGMv2_4622_28_12
Type:
Location: 12059 - 13030 (-)
Gene ID: HRGMv2_4622_28_13
Type: TC
Location: 13092 - 14510 (-)
Gene ID: HRGMv2_4622_28_14
Type: pfam
Location: 14695 - 15384 (+)
Gene ID: HRGMv2_4622_28_15
Type: pfam
Location: 15512 - 16048 (-)
Gene ID: HRGMv2_4622_28_16
Type: TC
Location: 16504 - 17319 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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