Cluster: HRGMv2_4622_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4622
- CGC Family ID: CGCFAM_00415
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4622_25 | HRGMv2_4622_25_14 | 11374 | 12282 | + | 3.A.1.1.36 |
| TC | HRGMv2_4622_25 | HRGMv2_4622_25_15 | 12292 | 13131 | + | 3.A.1.1.23 |
| CAZyme | HRGMv2_4622_25 | HRGMv2_4622_25_16 | 13128 | 14351 | + | GH32 |
Gene ID: HRGMv2_4622_25_14
Type: TC
Location: 11374 - 12282 (+)
Type: TC
Location: 11374 - 12282 (+)
Gene ID: HRGMv2_4622_25_15
Type: TC
Location: 12292 - 13131 (+)
Type: TC
Location: 12292 - 13131 (+)
Gene ID: HRGMv2_4622_25_16
Type: CAZyme
Location: 13128 - 14351 (+)
Type: CAZyme
Location: 13128 - 14351 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Propionibacteriaceae
Genus
Propionibacterium
Species
Propionibacterium acidifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.