Cluster: HRGMv2_4622_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4622
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4622_21 | HRGMv2_4622_21_17 | 15350 | 16459 | - | GT28 |
| TC | HRGMv2_4622_21 | HRGMv2_4622_21_18 | 16459 | 17736 | - | 2.A.103.1.4 |
| pfam | HRGMv2_4622_21 | HRGMv2_4622_21_19 | 17738 | 19198 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_4622_21 | HRGMv2_4622_21_20 | 19215 | 20309 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4622_21_17
Type: CAZyme
Location: 15350 - 16459 (-)
Type: CAZyme
Location: 15350 - 16459 (-)
Gene ID: HRGMv2_4622_21_18
Type: TC
Location: 16459 - 17736 (-)
Type: TC
Location: 16459 - 17736 (-)
Gene ID: HRGMv2_4622_21_19
Type: pfam
Location: 17738 - 19198 (-)
Type: pfam
Location: 17738 - 19198 (-)
Gene ID: HRGMv2_4622_21_20
Type: TC
Location: 19215 - 20309 (-)
Type: TC
Location: 19215 - 20309 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Propionibacteriaceae
Genus
Propionibacterium
Species
Propionibacterium acidifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.