Cluster: HRGMv2_4601_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4601
- CGC Family ID: CGCFAM_03445
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4601_70 | HRGMv2_4601_70_1 | 275 | 898 | + | 3.A.1.25.2 |
| CAZyme | HRGMv2_4601_70 | HRGMv2_4601_70_2 | 1081 | 2211 | + | GH3 |
| TC | HRGMv2_4601_70 | HRGMv2_4601_70_3 | 2988 | 3764 | - | 2.A.5.5.2 |
| TC | HRGMv2_4601_70 | HRGMv2_4601_70_4 | 3761 | 5491 | - | 3.A.1.21.1 |
| TC | HRGMv2_4601_70 | HRGMv2_4601_70_5 | 5484 | 5876 | - | 3.A.1.21.1 |
Gene ID: HRGMv2_4601_70_1
Type: TC
Location: 275 - 898 (+)
Type: TC
Location: 275 - 898 (+)
Gene ID: HRGMv2_4601_70_2
Type: CAZyme
Location: 1081 - 2211 (+)
Type: CAZyme
Location: 1081 - 2211 (+)
Gene ID: HRGMv2_4601_70_3
Type: TC
Location: 2988 - 3764 (-)
Type: TC
Location: 2988 - 3764 (-)
Gene ID: HRGMv2_4601_70_4
Type: TC
Location: 3761 - 5491 (-)
Type: TC
Location: 3761 - 5491 (-)
Gene ID: HRGMv2_4601_70_5
Type: TC
Location: 5484 - 5876 (-)
Type: TC
Location: 5484 - 5876 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.