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Cluster: HRGMv2_4598_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4598_8 HRGMv2_4598_8_3 1496 2371 - 3.A.1.24.5
TC HRGMv2_4598_8 HRGMv2_4598_8_4 2400 3065 - 3.A.1.24.5
TC HRGMv2_4598_8 HRGMv2_4598_8_5 3058 4077 - 3.A.1.24.2
pfam HRGMv2_4598_8 HRGMv2_4598_8_6 4099 5034 - HTS
pfam HRGMv2_4598_8 HRGMv2_4598_8_7 5098 6387 - Cys_Met_Meta_PP
CAZyme HRGMv2_4598_8 HRGMv2_4598_8_8 6854 7684 + GH73
TC HRGMv2_4598_8 HRGMv2_4598_8_9 7684 8841 + 2.A.1.46.5
TC HRGMv2_4598_8 HRGMv2_4598_8_10 8864 10027 + 2.A.1.46.5
Gene ID: HRGMv2_4598_8_3
Type: TC
Location: 1496 - 2371 (-)
Gene ID: HRGMv2_4598_8_4
Type: TC
Location: 2400 - 3065 (-)
Gene ID: HRGMv2_4598_8_5
Type: TC
Location: 3058 - 4077 (-)
Gene ID: HRGMv2_4598_8_6
Type: pfam
Location: 4099 - 5034 (-)
Gene ID: HRGMv2_4598_8_7
Type: pfam
Location: 5098 - 6387 (-)
Gene ID: HRGMv2_4598_8_8
Type: CAZyme
Location: 6854 - 7684 (+)
Gene ID: HRGMv2_4598_8_9
Type: TC
Location: 7684 - 8841 (+)
Gene ID: HRGMv2_4598_8_10
Type: TC
Location: 8864 - 10027 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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