Cluster: HRGMv2_4597_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4597
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4597_22 | HRGMv2_4597_22_7 | 2614 | 3309 | - | 2.A.115.2.9 |
| TF | HRGMv2_4597_22 | HRGMv2_4597_22_8 | 3449 | 4228 | + | MerR |
| TC | HRGMv2_4597_22 | HRGMv2_4597_22_9 | 4298 | 5920 | + | 3.A.1.106.15 |
| pfam | HRGMv2_4597_22 | HRGMv2_4597_22_10 | 6025 | 6429 | + | NDK |
| TC | HRGMv2_4597_22 | HRGMv2_4597_22_11 | 6598 | 8952 | + | 3.A.3.23.2 |
| CAZyme | HRGMv2_4597_22 | HRGMv2_4597_22_12 | 8949 | 10112 | + | GT4 |
Gene ID: HRGMv2_4597_22_7
Type: TC
Location: 2614 - 3309 (-)
Type: TC
Location: 2614 - 3309 (-)
Gene ID: HRGMv2_4597_22_8
Type: TF
Location: 3449 - 4228 (+)
Type: TF
Location: 3449 - 4228 (+)
Gene ID: HRGMv2_4597_22_9
Type: TC
Location: 4298 - 5920 (+)
Type: TC
Location: 4298 - 5920 (+)
Gene ID: HRGMv2_4597_22_10
Type: pfam
Location: 6025 - 6429 (+)
Type: pfam
Location: 6025 - 6429 (+)
Gene ID: HRGMv2_4597_22_11
Type: TC
Location: 6598 - 8952 (+)
Type: TC
Location: 6598 - 8952 (+)
Gene ID: HRGMv2_4597_22_12
Type: CAZyme
Location: 8949 - 10112 (+)
Type: CAZyme
Location: 8949 - 10112 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_B
Class
Peptococcia
Order
Peptococcales
Family
Peptococcaceae
Genus
UMGS1590
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.