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Cluster: HRGMv2_4596_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4596_2 HRGMv2_4596_2_210 213497 214222 + GT26
TC HRGMv2_4596_2 HRGMv2_4596_2_211 214433 216151 + 2.A.58.2.2
TC HRGMv2_4596_2 HRGMv2_4596_2_212 216283 217728 - 2.A.38.1.1
TC HRGMv2_4596_2 HRGMv2_4596_2_213 217733 219106 - 2.A.38.1.1
TF HRGMv2_4596_2 HRGMv2_4596_2_214 219137 220063 - HTH_1
TC HRGMv2_4596_2 HRGMv2_4596_2_215 220286 221020 + 9.B.20.1.4
TC HRGMv2_4596_2 HRGMv2_4596_2_216 221036 221722 + 9.B.20.1.4
Gene ID: HRGMv2_4596_2_210
Type: CAZyme
Location: 213497 - 214222 (+)
Gene ID: HRGMv2_4596_2_211
Type: TC
Location: 214433 - 216151 (+)
Gene ID: HRGMv2_4596_2_212
Type: TC
Location: 216283 - 217728 (-)
Gene ID: HRGMv2_4596_2_213
Type: TC
Location: 217733 - 219106 (-)
Gene ID: HRGMv2_4596_2_214
Type: TF
Location: 219137 - 220063 (-)
Gene ID: HRGMv2_4596_2_215
Type: TC
Location: 220286 - 221020 (+)
Gene ID: HRGMv2_4596_2_216
Type: TC
Location: 221036 - 221722 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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