Cluster: HRGMv2_4582_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4582
- CGC Family ID: CGCFAM_01467
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4582_82 | HRGMv2_4582_82_3 | 665 | 3226 | - | 3.A.3.5.15 |
| pfam | HRGMv2_4582_82 | HRGMv2_4582_82_4 | 3367 | 3804 | - | bPH_4 |
| NULL(UNKNOWN) | HRGMv2_4582_82 | HRGMv2_4582_82_5 | 3917 | 4327 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4582_82 | HRGMv2_4582_82_6 | 4543 | 6873 | + | GT51 |
Gene ID: HRGMv2_4582_82_3
Type: TC
Location: 665 - 3226 (-)
Type: TC
Location: 665 - 3226 (-)
Gene ID: HRGMv2_4582_82_4
Type: pfam
Location: 3367 - 3804 (-)
Type: pfam
Location: 3367 - 3804 (-)
Gene ID: HRGMv2_4582_82_5
Type:
Location: 3917 - 4327 (-)
Type:
Location: 3917 - 4327 (-)
Gene ID: HRGMv2_4582_82_6
Type: CAZyme
Location: 4543 - 6873 (+)
Type: CAZyme
Location: 4543 - 6873 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.