Cluster: HRGMv2_4582_CGC8
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4582
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4582_63 | HRGMv2_4582_63_1 | 1 | 1062 | + | GH13_39 |
| CAZyme | HRGMv2_4582_63 | HRGMv2_4582_63_2 | 1266 | 2756 | + | GH77 |
| pfam | HRGMv2_4582_63 | HRGMv2_4582_63_3 | 2781 | 4502 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| pfam | HRGMv2_4582_63 | HRGMv2_4582_63_4 | 4598 | 5152 | + | CrtO |
| CAZyme | HRGMv2_4582_63 | HRGMv2_4582_63_5 | 5191 | 6069 | - | CE4 |
| STP | HRGMv2_4582_63 | HRGMv2_4582_63_6 | 6211 | 7401 | + | Aminotran_1_2 |
| pfam | HRGMv2_4582_63 | HRGMv2_4582_63_7 | 7419 | 8438 | + | tRNA-synt_1b |
| TC | HRGMv2_4582_63 | HRGMv2_4582_63_8 | 8455 | 9444 | + | 9.B.146.1.4 |
Gene ID: HRGMv2_4582_63_1
Type: CAZyme
Location: 1 - 1062 (+)
Type: CAZyme
Location: 1 - 1062 (+)
Gene ID: HRGMv2_4582_63_2
Type: CAZyme
Location: 1266 - 2756 (+)
Type: CAZyme
Location: 1266 - 2756 (+)
Gene ID: HRGMv2_4582_63_3
Type: pfam
Location: 2781 - 4502 (+)
Type: pfam
Location: 2781 - 4502 (+)
Gene ID: HRGMv2_4582_63_4
Type: pfam
Location: 4598 - 5152 (+)
Type: pfam
Location: 4598 - 5152 (+)
Gene ID: HRGMv2_4582_63_5
Type: CAZyme
Location: 5191 - 6069 (-)
Type: CAZyme
Location: 5191 - 6069 (-)
Gene ID: HRGMv2_4582_63_6
Type: STP
Location: 6211 - 7401 (+)
Type: STP
Location: 6211 - 7401 (+)
Gene ID: HRGMv2_4582_63_7
Type: pfam
Location: 7419 - 8438 (+)
Type: pfam
Location: 7419 - 8438 (+)
Gene ID: HRGMv2_4582_63_8
Type: TC
Location: 8455 - 9444 (+)
Type: TC
Location: 8455 - 9444 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.