Cluster: HRGMv2_4582_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4582
- CGC Family ID: CGCFAM_02615
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4582_15 | HRGMv2_4582_15_21 | 18838 | 19605 | + | 3.A.1.134.4 |
| TC | HRGMv2_4582_15 | HRGMv2_4582_15_22 | 19598 | 21595 | + | 3.A.1.134.9 |
| pfam | HRGMv2_4582_15 | HRGMv2_4582_15_23 | 21681 | 22400 | + | TraX |
| CAZyme | HRGMv2_4582_15 | HRGMv2_4582_15_24 | 22439 | 22975 | - | CE4 |
Gene ID: HRGMv2_4582_15_21
Type: TC
Location: 18838 - 19605 (+)
Type: TC
Location: 18838 - 19605 (+)
Gene ID: HRGMv2_4582_15_22
Type: TC
Location: 19598 - 21595 (+)
Type: TC
Location: 19598 - 21595 (+)
Gene ID: HRGMv2_4582_15_23
Type: pfam
Location: 21681 - 22400 (+)
Type: pfam
Location: 21681 - 22400 (+)
Gene ID: HRGMv2_4582_15_24
Type: CAZyme
Location: 22439 - 22975 (-)
Type: CAZyme
Location: 22439 - 22975 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.