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Cluster: HRGMv2_4577_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4577_2 HRGMv2_4577_2_86 94902 96044 - 2.A.103.1.3
TC HRGMv2_4577_2 HRGMv2_4577_2_87 96068 96913 - 3.A.1.15.13
TC HRGMv2_4577_2 HRGMv2_4577_2_88 96904 97650 - 3.A.1.15.12
pfam HRGMv2_4577_2 HRGMv2_4577_2_89 97675 98571 - ZnuA
TC HRGMv2_4577_2 HRGMv2_4577_2_90 98649 99026 - 3.A.11.1.4
pfam HRGMv2_4577_2 HRGMv2_4577_2_91 99125 100603 - SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C
pfam HRGMv2_4577_2 HRGMv2_4577_2_92 100666 102207 - LysM | SipL | SipL
CAZyme HRGMv2_4577_2 HRGMv2_4577_2_93 102284 103042 - CE4
Gene ID: HRGMv2_4577_2_86
Type: TC
Location: 94902 - 96044 (-)
Gene ID: HRGMv2_4577_2_87
Type: TC
Location: 96068 - 96913 (-)
Gene ID: HRGMv2_4577_2_88
Type: TC
Location: 96904 - 97650 (-)
Gene ID: HRGMv2_4577_2_89
Type: pfam
Location: 97675 - 98571 (-)
Gene ID: HRGMv2_4577_2_90
Type: TC
Location: 98649 - 99026 (-)
Gene ID: HRGMv2_4577_2_91
Type: pfam
Location: 99125 - 100603 (-)
Gene ID: HRGMv2_4577_2_92
Type: pfam
Location: 100666 - 102207 (-)
Gene ID: HRGMv2_4577_2_93
Type: CAZyme
Location: 102284 - 103042 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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