Cluster: HRGMv2_4573_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4573
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4573_26 | HRGMv2_4573_26_13 | 13639 | 14775 | - | GT28 |
| TC | HRGMv2_4573_26 | HRGMv2_4573_26_14 | 14787 | 15989 | - | 2.A.103.1.3 |
| TC | HRGMv2_4573_26 | HRGMv2_4573_26_15 | 16018 | 17013 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_4573_26_13
Type: CAZyme
Location: 13639 - 14775 (-)
Type: CAZyme
Location: 13639 - 14775 (-)
Gene ID: HRGMv2_4573_26_14
Type: TC
Location: 14787 - 15989 (-)
Type: TC
Location: 14787 - 15989 (-)
Gene ID: HRGMv2_4573_26_15
Type: TC
Location: 16018 - 17013 (-)
Type: TC
Location: 16018 - 17013 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4573_26_13 | vegan > omnivore | 1.25026 | 0.02248 |
| HRGMv2_4573_26_14 | vegan > omnivore | 1.98784 | 0.02248 |
| HRGMv2_4573_26_15 | vegan > omnivore | 1.58156 | 0.02248 |