Cluster: HRGMv2_4573_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4573
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4573_16 | HRGMv2_4573_16_7 | 5937 | 6824 | + | 3.A.1.32.2 |
| TC | HRGMv2_4573_16 | HRGMv2_4573_16_8 | 6791 | 8449 | + | 3.A.1.32.2 |
| CAZyme | HRGMv2_4573_16 | HRGMv2_4573_16_9 | 8770 | 9618 | - | GH16_3 |
| CAZyme | HRGMv2_4573_16 | HRGMv2_4573_16_10 | 9636 | 11372 | - | GH16_3 |
Gene ID: HRGMv2_4573_16_7
Type: TC
Location: 5937 - 6824 (+)
Type: TC
Location: 5937 - 6824 (+)
Gene ID: HRGMv2_4573_16_8
Type: TC
Location: 6791 - 8449 (+)
Type: TC
Location: 6791 - 8449 (+)
Gene ID: HRGMv2_4573_16_9
Type: CAZyme
Location: 8770 - 9618 (-)
Type: CAZyme
Location: 8770 - 9618 (-)
Gene ID: HRGMv2_4573_16_10
Type: CAZyme
Location: 9636 - 11372 (-)
Type: CAZyme
Location: 9636 - 11372 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4573_16_9 | vegan > omnivore | 1.87816 | 0.02248 |