Cluster: HRGMv2_4573_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4573
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4573_38 | HRGMv2_4573_38_2 | 650 | 1813 | - | 2.A.103.1.3 |
| pfam | HRGMv2_4573_38 | HRGMv2_4573_38_3 | 2076 | 3518 | - | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| CAZyme | HRGMv2_4573_38 | HRGMv2_4573_38_4 | 3661 | 4476 | + | GT26 |
Gene ID: HRGMv2_4573_38_2
Type: TC
Location: 650 - 1813 (-)
Type: TC
Location: 650 - 1813 (-)
Gene ID: HRGMv2_4573_38_3
Type: pfam
Location: 2076 - 3518 (-)
Type: pfam
Location: 2076 - 3518 (-)
Gene ID: HRGMv2_4573_38_4
Type: CAZyme
Location: 3661 - 4476 (+)
Type: CAZyme
Location: 3661 - 4476 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.