Cluster: HRGMv2_4572_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4572
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4572_2 | HRGMv2_4572_2_70 | 81828 | 84908 | + | GH38 |
| pfam | HRGMv2_4572_2 | HRGMv2_4572_2_71 | 84927 | 85328 | + | 4HBT |
| CAZyme | HRGMv2_4572_2 | HRGMv2_4572_2_72 | 85338 | 87173 | + | GH110 |
| TF | HRGMv2_4572_2 | HRGMv2_4572_2_73 | 87990 | 88169 | + | HTH_3 |
| pfam | HRGMv2_4572_2 | HRGMv2_4572_2_74 | 88236 | 89672 | - | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| TC | HRGMv2_4572_2 | HRGMv2_4572_2_75 | 89693 | 89929 | - | 3.D.1.6.4 |
Gene ID: HRGMv2_4572_2_70
Type: CAZyme
Location: 81828 - 84908 (+)
Type: CAZyme
Location: 81828 - 84908 (+)
Gene ID: HRGMv2_4572_2_71
Type: pfam
Location: 84927 - 85328 (+)
Type: pfam
Location: 84927 - 85328 (+)
Gene ID: HRGMv2_4572_2_72
Type: CAZyme
Location: 85338 - 87173 (+)
Type: CAZyme
Location: 85338 - 87173 (+)
Gene ID: HRGMv2_4572_2_73
Type: TF
Location: 87990 - 88169 (+)
Type: TF
Location: 87990 - 88169 (+)
Gene ID: HRGMv2_4572_2_74
Type: pfam
Location: 88236 - 89672 (-)
Type: pfam
Location: 88236 - 89672 (-)
Gene ID: HRGMv2_4572_2_75
Type: TC
Location: 89693 - 89929 (-)
Type: TC
Location: 89693 - 89929 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.