Cluster: HRGMv2_4572_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4572
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4572_2 | HRGMv2_4572_2_45 | 47877 | 50501 | + | 4.A.2.1.17 |
| NULL(UNKNOWN) | HRGMv2_4572_2 | HRGMv2_4572_2_46 | 50944 | 51474 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4572_2 | HRGMv2_4572_2_47 | 51651 | 52625 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | NmrA | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | HRGMv2_4572_2 | HRGMv2_4572_2_48 | 52641 | 54164 | + | GH63 |
| pfam | HRGMv2_4572_2 | HRGMv2_4572_2_49 | 54167 | 54940 | + | AP_endonuc_2 |
| TC | HRGMv2_4572_2 | HRGMv2_4572_2_50 | 55335 | 56957 | - | 4.C.1.1.4 |
Gene ID: HRGMv2_4572_2_45
Type: TC
Location: 47877 - 50501 (+)
Type: TC
Location: 47877 - 50501 (+)
Gene ID: HRGMv2_4572_2_46
Type:
Location: 50944 - 51474 (-)
Type:
Location: 50944 - 51474 (-)
Gene ID: HRGMv2_4572_2_47
Type: pfam
Location: 51651 - 52625 (+)
Type: pfam
Location: 51651 - 52625 (+)
Gene ID: HRGMv2_4572_2_48
Type: CAZyme
Location: 52641 - 54164 (+)
Type: CAZyme
Location: 52641 - 54164 (+)
Gene ID: HRGMv2_4572_2_49
Type: pfam
Location: 54167 - 54940 (+)
Type: pfam
Location: 54167 - 54940 (+)
Gene ID: HRGMv2_4572_2_50
Type: TC
Location: 55335 - 56957 (-)
Type: TC
Location: 55335 - 56957 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.