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Cluster: HRGMv2_4572_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4572_1 HRGMv2_4572_1_114 128268 128975 + 3.A.1.147.6
NULL(UNKNOWN) HRGMv2_4572_1 HRGMv2_4572_1_115 128975 130567 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4572_1 HRGMv2_4572_1_116 130612 130968 + ACT_7
CAZyme HRGMv2_4572_1 HRGMv2_4572_1_117 130980 133403 + GH38
pfam HRGMv2_4572_1 HRGMv2_4572_1_118 133447 134055 - TPK_catalytic | TPK_B1_binding
TC HRGMv2_4572_1 HRGMv2_4572_1_119 134189 135574 - 2.A.40.1.2
STP HRGMv2_4572_1 HRGMv2_4572_1_120 135626 136156 - Pribosyltran
pfam HRGMv2_4572_1 HRGMv2_4572_1_121 136386 137261 - RNase_T
CAZyme HRGMv2_4572_1 HRGMv2_4572_1_122 137575 138264 + GT32
Gene ID: HRGMv2_4572_1_114
Type: TC
Location: 128268 - 128975 (+)
Gene ID: HRGMv2_4572_1_115
Type:
Location: 128975 - 130567 (+)
Gene ID: HRGMv2_4572_1_116
Type: pfam
Location: 130612 - 130968 (+)
Gene ID: HRGMv2_4572_1_117
Type: CAZyme
Location: 130980 - 133403 (+)
Gene ID: HRGMv2_4572_1_118
Type: pfam
Location: 133447 - 134055 (-)
Gene ID: HRGMv2_4572_1_119
Type: TC
Location: 134189 - 135574 (-)
Gene ID: HRGMv2_4572_1_120
Type: STP
Location: 135626 - 136156 (-)
Gene ID: HRGMv2_4572_1_121
Type: pfam
Location: 136386 - 137261 (-)
Gene ID: HRGMv2_4572_1_122
Type: CAZyme
Location: 137575 - 138264 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
CAG-488
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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