Cluster: HRGMv2_4572_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4572
- CGC Family ID: CGCFAM_00571
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4572_53 | HRGMv2_4572_53_3 | 655 | 2874 | + | 3.A.7.16.1 |
| STP | HRGMv2_4572_53 | HRGMv2_4572_53_4 | 2858 | 3580 | + | Pribosyltran |
| TC | HRGMv2_4572_53 | HRGMv2_4572_53_5 | 3618 | 4652 | + | 1.A.33.1.5 |
| peptidase | HRGMv2_4572_53 | HRGMv2_4572_53_6 | 4655 | 5389 | + | S09.UPW |
| CAZyme | HRGMv2_4572_53 | HRGMv2_4572_53_7 | 5461 | 6369 | + | GT2 |
Gene ID: HRGMv2_4572_53_3
Type: TC
Location: 655 - 2874 (+)
Type: TC
Location: 655 - 2874 (+)
Gene ID: HRGMv2_4572_53_4
Type: STP
Location: 2858 - 3580 (+)
Type: STP
Location: 2858 - 3580 (+)
Gene ID: HRGMv2_4572_53_5
Type: TC
Location: 3618 - 4652 (+)
Type: TC
Location: 3618 - 4652 (+)
Gene ID: HRGMv2_4572_53_6
Type: peptidase
Location: 4655 - 5389 (+)
Type: peptidase
Location: 4655 - 5389 (+)
Gene ID: HRGMv2_4572_53_7
Type: CAZyme
Location: 5461 - 6369 (+)
Type: CAZyme
Location: 5461 - 6369 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.