Cluster: HRGMv2_4572_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4572
- CGC Family ID: CGCFAM_00172
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4572_36 | HRGMv2_4572_36_13 | 11737 | 12498 | + | 3.A.1.134.4 |
| TC | HRGMv2_4572_36 | HRGMv2_4572_36_14 | 12498 | 14558 | + | 3.A.1.134.9 |
| NULL(UNKNOWN) | HRGMv2_4572_36 | HRGMv2_4572_36_15 | 14562 | 15035 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4572_36 | HRGMv2_4572_36_16 | 15032 | 15181 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4572_36 | HRGMv2_4572_36_17 | 15562 | 18201 | - | GT2 |
Gene ID: HRGMv2_4572_36_13
Type: TC
Location: 11737 - 12498 (+)
Type: TC
Location: 11737 - 12498 (+)
Gene ID: HRGMv2_4572_36_14
Type: TC
Location: 12498 - 14558 (+)
Type: TC
Location: 12498 - 14558 (+)
Gene ID: HRGMv2_4572_36_15
Type:
Location: 14562 - 15035 (+)
Type:
Location: 14562 - 15035 (+)
Gene ID: HRGMv2_4572_36_16
Type:
Location: 15032 - 15181 (+)
Type:
Location: 15032 - 15181 (+)
Gene ID: HRGMv2_4572_36_17
Type: CAZyme
Location: 15562 - 18201 (-)
Type: CAZyme
Location: 15562 - 18201 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.