Cluster: HRGMv2_4572_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4572
- CGC Family ID: CGCFAM_07765
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4572_30 | HRGMv2_4572_30_11 | 9803 | 10870 | + | GH179 |
| pfam | HRGMv2_4572_30 | HRGMv2_4572_30_12 | 10925 | 14731 | - | Dockerin_1 | CotH | CotH |
| pfam | HRGMv2_4572_30 | HRGMv2_4572_30_13 | 14784 | 15362 | - | 5-FTHF_cyc-lig |
| TC | HRGMv2_4572_30 | HRGMv2_4572_30_14 | 15478 | 16239 | - | 2.A.5.5.2 |
Gene ID: HRGMv2_4572_30_11
Type: CAZyme
Location: 9803 - 10870 (+)
Type: CAZyme
Location: 9803 - 10870 (+)
Gene ID: HRGMv2_4572_30_12
Type: pfam
Location: 10925 - 14731 (-)
Type: pfam
Location: 10925 - 14731 (-)
Gene ID: HRGMv2_4572_30_13
Type: pfam
Location: 14784 - 15362 (-)
Type: pfam
Location: 14784 - 15362 (-)
Gene ID: HRGMv2_4572_30_14
Type: TC
Location: 15478 - 16239 (-)
Type: TC
Location: 15478 - 16239 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.