Cluster: HRGMv2_4572_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4572
- CGC Family ID: CGCFAM_02680
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4572_18 | HRGMv2_4572_18_15 | 16103 | 18502 | + | GH31_15 |
| pfam | HRGMv2_4572_18 | HRGMv2_4572_18_16 | 18518 | 18976 | - | VanZ |
| TC | HRGMv2_4572_18 | HRGMv2_4572_18_17 | 18976 | 20604 | - | 3.A.1.5.2 |
| pfam | HRGMv2_4572_18 | HRGMv2_4572_18_18 | 20764 | 22083 | + | RmuC |
| CAZyme | HRGMv2_4572_18 | HRGMv2_4572_18_19 | 22089 | 24533 | + | GH3 |
Gene ID: HRGMv2_4572_18_15
Type: CAZyme
Location: 16103 - 18502 (+)
Type: CAZyme
Location: 16103 - 18502 (+)
Gene ID: HRGMv2_4572_18_16
Type: pfam
Location: 18518 - 18976 (-)
Type: pfam
Location: 18518 - 18976 (-)
Gene ID: HRGMv2_4572_18_17
Type: TC
Location: 18976 - 20604 (-)
Type: TC
Location: 18976 - 20604 (-)
Gene ID: HRGMv2_4572_18_18
Type: pfam
Location: 20764 - 22083 (+)
Type: pfam
Location: 20764 - 22083 (+)
Gene ID: HRGMv2_4572_18_19
Type: CAZyme
Location: 22089 - 24533 (+)
Type: CAZyme
Location: 22089 - 24533 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.