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Cluster: HRGMv2_4572_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4572_13 HRGMv2_4572_13_38 34329 35594 + GT4
pfam HRGMv2_4572_13 HRGMv2_4572_13_39 35608 36855 + Wzy_C
TC HRGMv2_4572_13 HRGMv2_4572_13_40 36873 38312 + 8.A.3.2.2
NULL(UNKNOWN) HRGMv2_4572_13 HRGMv2_4572_13_41 38385 38996 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4572_13 HRGMv2_4572_13_42 38996 40333 + PG_binding_1 | PG_binding_1 | PG_binding_1 | SpoIID
TC HRGMv2_4572_13 HRGMv2_4572_13_43 40394 41815 + 9.A.11.1.1
NULL(UNKNOWN) HRGMv2_4572_13 HRGMv2_4572_13_44 41868 42647 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4572_13 HRGMv2_4572_13_45 42730 43710 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4572_13 HRGMv2_4572_13_46 43827 45299 + 2.A.2.3.3
Gene ID: HRGMv2_4572_13_38
Type: CAZyme
Location: 34329 - 35594 (+)
Gene ID: HRGMv2_4572_13_39
Type: pfam
Location: 35608 - 36855 (+)
Gene ID: HRGMv2_4572_13_40
Type: TC
Location: 36873 - 38312 (+)
Gene ID: HRGMv2_4572_13_41
Type:
Location: 38385 - 38996 (+)
Gene ID: HRGMv2_4572_13_42
Type: pfam
Location: 38996 - 40333 (+)
Gene ID: HRGMv2_4572_13_43
Type: TC
Location: 40394 - 41815 (+)
Gene ID: HRGMv2_4572_13_44
Type:
Location: 41868 - 42647 (+)
Gene ID: HRGMv2_4572_13_45
Type:
Location: 42730 - 43710 (+)
Gene ID: HRGMv2_4572_13_46
Type: TC
Location: 43827 - 45299 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
CAG-488
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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