Cluster: HRGMv2_4572_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4572
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4572_11 | HRGMv2_4572_11_3 | 3760 | 5106 | - | GH29 |
| pfam | HRGMv2_4572_11 | HRGMv2_4572_11_4 | 5187 | 5612 | - | CTP_transf_like |
| pfam | HRGMv2_4572_11 | HRGMv2_4572_11_5 | 5616 | 6479 | - | LicD |
| TC | HRGMv2_4572_11 | HRGMv2_4572_11_6 | 6646 | 7743 | + | 1.B.79.1.2 |
| TC | HRGMv2_4572_11 | HRGMv2_4572_11_7 | 7756 | 8868 | + | 1.B.79.1.2 |
Gene ID: HRGMv2_4572_11_3
Type: CAZyme
Location: 3760 - 5106 (-)
Type: CAZyme
Location: 3760 - 5106 (-)
Gene ID: HRGMv2_4572_11_4
Type: pfam
Location: 5187 - 5612 (-)
Type: pfam
Location: 5187 - 5612 (-)
Gene ID: HRGMv2_4572_11_5
Type: pfam
Location: 5616 - 6479 (-)
Type: pfam
Location: 5616 - 6479 (-)
Gene ID: HRGMv2_4572_11_6
Type: TC
Location: 6646 - 7743 (+)
Type: TC
Location: 6646 - 7743 (+)
Gene ID: HRGMv2_4572_11_7
Type: TC
Location: 7756 - 8868 (+)
Type: TC
Location: 7756 - 8868 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.