Cluster: HRGMv2_4572_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4572
- CGC Family ID: CGCFAM_02681
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4572_10 | HRGMv2_4572_10_42 | 40375 | 41274 | - | 3.A.11.1.1 |
| pfam | HRGMv2_4572_10 | HRGMv2_4572_10_43 | 41252 | 43096 | - | Radical_SAM_N | DUF3362 |
| TC | HRGMv2_4572_10 | HRGMv2_4572_10_44 | 43100 | 45700 | - | 3.A.12.1.1 |
| pfam | HRGMv2_4572_10 | HRGMv2_4572_10_45 | 45848 | 46702 | + | Aldose_epim |
| pfam | HRGMv2_4572_10 | HRGMv2_4572_10_46 | 46776 | 47693 | - | LRR_5 | LRR_5 |
| CAZyme | HRGMv2_4572_10 | HRGMv2_4572_10_47 | 47704 | 49377 | - | GH13_31 |
Gene ID: HRGMv2_4572_10_42
Type: TC
Location: 40375 - 41274 (-)
Type: TC
Location: 40375 - 41274 (-)
Gene ID: HRGMv2_4572_10_43
Type: pfam
Location: 41252 - 43096 (-)
Type: pfam
Location: 41252 - 43096 (-)
Gene ID: HRGMv2_4572_10_44
Type: TC
Location: 43100 - 45700 (-)
Type: TC
Location: 43100 - 45700 (-)
Gene ID: HRGMv2_4572_10_45
Type: pfam
Location: 45848 - 46702 (+)
Type: pfam
Location: 45848 - 46702 (+)
Gene ID: HRGMv2_4572_10_46
Type: pfam
Location: 46776 - 47693 (-)
Type: pfam
Location: 46776 - 47693 (-)
Gene ID: HRGMv2_4572_10_47
Type: CAZyme
Location: 47704 - 49377 (-)
Type: CAZyme
Location: 47704 - 49377 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.