Cluster: HRGMv2_4572_CGC2
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_4572
- CGC Family ID: CGCFAM_02130
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4572_1 | HRGMv2_4572_1_23 | 22759 | 24180 | - | GT5 |
| pfam | HRGMv2_4572_1 | HRGMv2_4572_1_24 | 24228 | 25337 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_4572_1 | HRGMv2_4572_1_25 | 25341 | 26552 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_4572_1 | HRGMv2_4572_1_26 | 26566 | 28497 | - | CBM48 | GH13_9 |
| NULL(UNKNOWN) | HRGMv2_4572_1 | HRGMv2_4572_1_27 | 28726 | 29037 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4572_1 | HRGMv2_4572_1_28 | 29298 | 31175 | + | 9.B.18.2.1 |
| TC | HRGMv2_4572_1 | HRGMv2_4572_1_29 | 31201 | 31815 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_4572_1 | HRGMv2_4572_1_30 | 31833 | 32954 | + | GT4 |
| TC | HRGMv2_4572_1 | HRGMv2_4572_1_31 | 32929 | 34125 | + | 9.B.183.1.9 |
| pfam | HRGMv2_4572_1 | HRGMv2_4572_1_32 | 34136 | 35284 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_4572_1 | HRGMv2_4572_1_33 | 35298 | 36485 | + | GT4 |
| CAZyme | HRGMv2_4572_1 | HRGMv2_4572_1_34 | 36496 | 37647 | + | GH105 |
| pfam | HRGMv2_4572_1 | HRGMv2_4572_1_35 | 37664 | 38422 | + | CpsB_CapC |
| TC | HRGMv2_4572_1 | HRGMv2_4572_1_36 | 38477 | 40222 | + | 8.A.3.1.2 |
| pfam | HRGMv2_4572_1 | HRGMv2_4572_1_37 | 40246 | 41382 | + | DegT_DnrJ_EryC1 |
| sulfatase | HRGMv2_4572_1 | HRGMv2_4572_1_38 | 41500 | 43311 | + | S1_97 |
| TC | HRGMv2_4572_1 | HRGMv2_4572_1_39 | 43412 | 44941 | + | 2.A.2.1.1 |
Gene ID: HRGMv2_4572_1_23
Type: CAZyme
Location: 22759 - 24180 (-)
Type: CAZyme
Location: 22759 - 24180 (-)
Gene ID: HRGMv2_4572_1_24
Type: pfam
Location: 24228 - 25337 (-)
Type: pfam
Location: 24228 - 25337 (-)
Gene ID: HRGMv2_4572_1_25
Type: pfam
Location: 25341 - 26552 (-)
Type: pfam
Location: 25341 - 26552 (-)
Gene ID: HRGMv2_4572_1_26
Type: CAZyme
Location: 26566 - 28497 (-)
Type: CAZyme
Location: 26566 - 28497 (-)
Gene ID: HRGMv2_4572_1_27
Type:
Location: 28726 - 29037 (-)
Type:
Location: 28726 - 29037 (-)
Gene ID: HRGMv2_4572_1_28
Type: TC
Location: 29298 - 31175 (+)
Type: TC
Location: 29298 - 31175 (+)
Gene ID: HRGMv2_4572_1_29
Type: TC
Location: 31201 - 31815 (+)
Type: TC
Location: 31201 - 31815 (+)
Gene ID: HRGMv2_4572_1_30
Type: CAZyme
Location: 31833 - 32954 (+)
Type: CAZyme
Location: 31833 - 32954 (+)
Gene ID: HRGMv2_4572_1_31
Type: TC
Location: 32929 - 34125 (+)
Type: TC
Location: 32929 - 34125 (+)
Gene ID: HRGMv2_4572_1_32
Type: pfam
Location: 34136 - 35284 (+)
Type: pfam
Location: 34136 - 35284 (+)
Gene ID: HRGMv2_4572_1_33
Type: CAZyme
Location: 35298 - 36485 (+)
Type: CAZyme
Location: 35298 - 36485 (+)
Gene ID: HRGMv2_4572_1_34
Type: CAZyme
Location: 36496 - 37647 (+)
Type: CAZyme
Location: 36496 - 37647 (+)
Gene ID: HRGMv2_4572_1_35
Type: pfam
Location: 37664 - 38422 (+)
Type: pfam
Location: 37664 - 38422 (+)
Gene ID: HRGMv2_4572_1_36
Type: TC
Location: 38477 - 40222 (+)
Type: TC
Location: 38477 - 40222 (+)
Gene ID: HRGMv2_4572_1_37
Type: pfam
Location: 40246 - 41382 (+)
Type: pfam
Location: 40246 - 41382 (+)
Gene ID: HRGMv2_4572_1_38
Type: sulfatase
Location: 41500 - 43311 (+)
Type: sulfatase
Location: 41500 - 43311 (+)
Gene ID: HRGMv2_4572_1_39
Type: TC
Location: 43412 - 44941 (+)
Type: TC
Location: 43412 - 44941 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.