Cluster: HRGMv2_4572_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4572
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4572_8 | HRGMv2_4572_8_30 | 31283 | 32512 | - | GH109 |
| pfam | HRGMv2_4572_8 | HRGMv2_4572_8_31 | 32831 | 33622 | - | rve | HTH_21 | rve_2 | rve_3 |
| TF | HRGMv2_4572_8 | HRGMv2_4572_8_32 | 33799 | 34011 | - | HTH_3 |
| TC | HRGMv2_4572_8 | HRGMv2_4572_8_33 | 34316 | 36775 | - | 3.A.9.1.2 |
Gene ID: HRGMv2_4572_8_30
Type: CAZyme
Location: 31283 - 32512 (-)
Type: CAZyme
Location: 31283 - 32512 (-)
Gene ID: HRGMv2_4572_8_31
Type: pfam
Location: 32831 - 33622 (-)
Type: pfam
Location: 32831 - 33622 (-)
Gene ID: HRGMv2_4572_8_32
Type: TF
Location: 33799 - 34011 (-)
Type: TF
Location: 33799 - 34011 (-)
Gene ID: HRGMv2_4572_8_33
Type: TC
Location: 34316 - 36775 (-)
Type: TC
Location: 34316 - 36775 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.