Cluster: HRGMv2_4572_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4572
- CGC Family ID: CGCFAM_01119
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4572_7 | HRGMv2_4572_7_52 | 50714 | 51577 | + | 2.A.7.2.1 |
| TC | HRGMv2_4572_7 | HRGMv2_4572_7_53 | 51667 | 53073 | + | 2.A.1.84.3 |
| CAZyme | HRGMv2_4572_7 | HRGMv2_4572_7_54 | 53306 | 53992 | + | GT2 |
| CAZyme | HRGMv2_4572_7 | HRGMv2_4572_7_55 | 54023 | 54784 | + | GT2 |
| TC | HRGMv2_4572_7 | HRGMv2_4572_7_56 | 54795 | 55655 | + | 3.A.1.103.1 |
| TC | HRGMv2_4572_7 | HRGMv2_4572_7_57 | 55673 | 56416 | + | 3.A.1.103.1 |
Gene ID: HRGMv2_4572_7_52
Type: TC
Location: 50714 - 51577 (+)
Type: TC
Location: 50714 - 51577 (+)
Gene ID: HRGMv2_4572_7_53
Type: TC
Location: 51667 - 53073 (+)
Type: TC
Location: 51667 - 53073 (+)
Gene ID: HRGMv2_4572_7_54
Type: CAZyme
Location: 53306 - 53992 (+)
Type: CAZyme
Location: 53306 - 53992 (+)
Gene ID: HRGMv2_4572_7_55
Type: CAZyme
Location: 54023 - 54784 (+)
Type: CAZyme
Location: 54023 - 54784 (+)
Gene ID: HRGMv2_4572_7_56
Type: TC
Location: 54795 - 55655 (+)
Type: TC
Location: 54795 - 55655 (+)
Gene ID: HRGMv2_4572_7_57
Type: TC
Location: 55673 - 56416 (+)
Type: TC
Location: 55673 - 56416 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.