Cluster: HRGMv2_4572_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4572
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4572_7 | HRGMv2_4572_7_25 | 24052 | 24606 | + | 3.A.1.25.5 |
| pfam | HRGMv2_4572_7 | HRGMv2_4572_7_26 | 24971 | 26227 | - | PGA_cap |
| pfam | HRGMv2_4572_7 | HRGMv2_4572_7_27 | 26264 | 27025 | - | DUF975 |
| CAZyme | HRGMv2_4572_7 | HRGMv2_4572_7_28 | 27134 | 29737 | + | GT2 |
Gene ID: HRGMv2_4572_7_25
Type: TC
Location: 24052 - 24606 (+)
Type: TC
Location: 24052 - 24606 (+)
Gene ID: HRGMv2_4572_7_26
Type: pfam
Location: 24971 - 26227 (-)
Type: pfam
Location: 24971 - 26227 (-)
Gene ID: HRGMv2_4572_7_27
Type: pfam
Location: 26264 - 27025 (-)
Type: pfam
Location: 26264 - 27025 (-)
Gene ID: HRGMv2_4572_7_28
Type: CAZyme
Location: 27134 - 29737 (+)
Type: CAZyme
Location: 27134 - 29737 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.