Cluster: HRGMv2_4572_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4572
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4572_6 | HRGMv2_4572_6_48 | 46039 | 46917 | + | 3.A.1.140.1 |
| pfam | HRGMv2_4572_6 | HRGMv2_4572_6_49 | 46914 | 47840 | + | FtsX | FtsX_ECD |
| STP | HRGMv2_4572_6 | HRGMv2_4572_6_50 | 47824 | 49140 | + | Peptidase_M23 |
| CAZyme | HRGMv2_4572_6 | HRGMv2_4572_6_51 | 49197 | 50480 | - | GH125 |
| CAZyme | HRGMv2_4572_6 | HRGMv2_4572_6_52 | 50508 | 52583 | - | GH89 |
| sulfatase | HRGMv2_4572_6 | HRGMv2_4572_6_53 | 52714 | 53244 | - | S1_4 |
| CAZyme | HRGMv2_4572_6 | HRGMv2_4572_6_54 | 53280 | 55457 | - | GH78 |
Gene ID: HRGMv2_4572_6_48
Type: TC
Location: 46039 - 46917 (+)
Type: TC
Location: 46039 - 46917 (+)
Gene ID: HRGMv2_4572_6_49
Type: pfam
Location: 46914 - 47840 (+)
Type: pfam
Location: 46914 - 47840 (+)
Gene ID: HRGMv2_4572_6_50
Type: STP
Location: 47824 - 49140 (+)
Type: STP
Location: 47824 - 49140 (+)
Gene ID: HRGMv2_4572_6_51
Type: CAZyme
Location: 49197 - 50480 (-)
Type: CAZyme
Location: 49197 - 50480 (-)
Gene ID: HRGMv2_4572_6_52
Type: CAZyme
Location: 50508 - 52583 (-)
Type: CAZyme
Location: 50508 - 52583 (-)
Gene ID: HRGMv2_4572_6_53
Type: sulfatase
Location: 52714 - 53244 (-)
Type: sulfatase
Location: 52714 - 53244 (-)
Gene ID: HRGMv2_4572_6_54
Type: CAZyme
Location: 53280 - 55457 (-)
Type: CAZyme
Location: 53280 - 55457 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.