Cluster: HRGMv2_4572_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_4572
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4572_5 | HRGMv2_4572_5_15 | 23101 | 24117 | - | GT2 |
| pfam | HRGMv2_4572_5 | HRGMv2_4572_5_16 | 24138 | 25151 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| pfam | HRGMv2_4572_5 | HRGMv2_4572_5_17 | 25159 | 26259 | - | Radical_SAM | SPASM |
| CAZyme | HRGMv2_4572_5 | HRGMv2_4572_5_18 | 26265 | 27446 | - | GT4 |
| CAZyme | HRGMv2_4572_5 | HRGMv2_4572_5_19 | 27448 | 28635 | - | GT4 |
| CAZyme | HRGMv2_4572_5 | HRGMv2_4572_5_20 | 28638 | 29774 | - | GT4 |
| TC | HRGMv2_4572_5 | HRGMv2_4572_5_21 | 29775 | 30461 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_4572_5_15
Type: CAZyme
Location: 23101 - 24117 (-)
Type: CAZyme
Location: 23101 - 24117 (-)
Gene ID: HRGMv2_4572_5_16
Type: pfam
Location: 24138 - 25151 (-)
Type: pfam
Location: 24138 - 25151 (-)
Gene ID: HRGMv2_4572_5_17
Type: pfam
Location: 25159 - 26259 (-)
Type: pfam
Location: 25159 - 26259 (-)
Gene ID: HRGMv2_4572_5_18
Type: CAZyme
Location: 26265 - 27446 (-)
Type: CAZyme
Location: 26265 - 27446 (-)
Gene ID: HRGMv2_4572_5_19
Type: CAZyme
Location: 27448 - 28635 (-)
Type: CAZyme
Location: 27448 - 28635 (-)
Gene ID: HRGMv2_4572_5_20
Type: CAZyme
Location: 28638 - 29774 (-)
Type: CAZyme
Location: 28638 - 29774 (-)
Gene ID: HRGMv2_4572_5_21
Type: TC
Location: 29775 - 30461 (-)
Type: TC
Location: 29775 - 30461 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.