Cluster: HRGMv2_4572_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4572
- CGC Family ID: CGCFAM_03560
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4572_1 | HRGMv2_4572_1_1 | 3 | 1517 | + | GH25 |
| pfam | HRGMv2_4572_1 | HRGMv2_4572_1_2 | 1523 | 2224 | + | Metallophos | Metallophos_2 |
| TC | HRGMv2_4572_1 | HRGMv2_4572_1_3 | 2226 | 2891 | + | 1.A.62.2.1 |
| pfam | HRGMv2_4572_1 | HRGMv2_4572_1_4 | 2951 | 4441 | - | Metallophos | Pur_ac_phosph_N |
| TC | HRGMv2_4572_1 | HRGMv2_4572_1_5 | 4625 | 5281 | - | 9.B.105.1.3 |
Gene ID: HRGMv2_4572_1_1
Type: CAZyme
Location: 3 - 1517 (+)
Type: CAZyme
Location: 3 - 1517 (+)
Gene ID: HRGMv2_4572_1_2
Type: pfam
Location: 1523 - 2224 (+)
Type: pfam
Location: 1523 - 2224 (+)
Gene ID: HRGMv2_4572_1_3
Type: TC
Location: 2226 - 2891 (+)
Type: TC
Location: 2226 - 2891 (+)
Gene ID: HRGMv2_4572_1_4
Type: pfam
Location: 2951 - 4441 (-)
Type: pfam
Location: 2951 - 4441 (-)
Gene ID: HRGMv2_4572_1_5
Type: TC
Location: 4625 - 5281 (-)
Type: TC
Location: 4625 - 5281 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.