Cluster: HRGMv2_4571_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4571
- CGC Family ID: CGCFAM_00172
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4571_17 | HRGMv2_4571_17_10 | 15026 | 15757 | + | GT2 |
| peptidase | HRGMv2_4571_17 | HRGMv2_4571_17_11 | 15768 | 17261 | + | S12.UPW |
| NULL(UNKNOWN) | HRGMv2_4571_17 | HRGMv2_4571_17_12 | 17385 | 17510 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4571_17 | HRGMv2_4571_17_13 | 17722 | 18483 | + | 3.A.1.134.4 |
Gene ID: HRGMv2_4571_17_10
Type: CAZyme
Location: 15026 - 15757 (+)
Type: CAZyme
Location: 15026 - 15757 (+)
Gene ID: HRGMv2_4571_17_11
Type: peptidase
Location: 15768 - 17261 (+)
Type: peptidase
Location: 15768 - 17261 (+)
Gene ID: HRGMv2_4571_17_12
Type:
Location: 17385 - 17510 (+)
Type:
Location: 17385 - 17510 (+)
Gene ID: HRGMv2_4571_17_13
Type: TC
Location: 17722 - 18483 (+)
Type: TC
Location: 17722 - 18483 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.