Cluster: HRGMv2_4571_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4571
- CGC Family ID: CGCFAM_00104
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4571_16 | HRGMv2_4571_16_30 | 27707 | 28747 | - | 9.B.18.2.1 |
| pfam | HRGMv2_4571_16 | HRGMv2_4571_16_31 | 28760 | 30223 | - | AA_permease | AA_permease_2 |
| CAZyme | HRGMv2_4571_16 | HRGMv2_4571_16_32 | 30287 | 31474 | - | GT4 |
Gene ID: HRGMv2_4571_16_30
Type: TC
Location: 27707 - 28747 (-)
Type: TC
Location: 27707 - 28747 (-)
Gene ID: HRGMv2_4571_16_31
Type: pfam
Location: 28760 - 30223 (-)
Type: pfam
Location: 28760 - 30223 (-)
Gene ID: HRGMv2_4571_16_32
Type: CAZyme
Location: 30287 - 31474 (-)
Type: CAZyme
Location: 30287 - 31474 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.