Cluster: HRGMv2_4571_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4571
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4571_11 | HRGMv2_4571_11_28 | 29789 | 32935 | + | CBM13 | CBM35 | CE12 | CE12 |
| pfam | HRGMv2_4571_11 | HRGMv2_4571_11_29 | 33075 | 33260 | + | Ribosomal_L28 |
| TC | HRGMv2_4571_11 | HRGMv2_4571_11_30 | 33595 | 34269 | + | 9.B.149.1.11 |
Gene ID: HRGMv2_4571_11_28
Type: CAZyme
Location: 29789 - 32935 (+)
Type: CAZyme
Location: 29789 - 32935 (+)
Gene ID: HRGMv2_4571_11_29
Type: pfam
Location: 33075 - 33260 (+)
Type: pfam
Location: 33075 - 33260 (+)
Gene ID: HRGMv2_4571_11_30
Type: TC
Location: 33595 - 34269 (+)
Type: TC
Location: 33595 - 34269 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.