Cluster: HRGMv2_4571_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4571
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4571_128 | HRGMv2_4571_128_1 | 1 | 1452 | - | GH53 |
| pfam | HRGMv2_4571_128 | HRGMv2_4571_128_2 | 1498 | 3051 | + | IMS | IMS_C |
| NULL(UNKNOWN) | HRGMv2_4571_128 | HRGMv2_4571_128_3 | 3048 | 3467 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4571_128 | HRGMv2_4571_128_4 | 3596 | 5365 | + | 3.A.18.1.1 |
Gene ID: HRGMv2_4571_128_1
Type: CAZyme
Location: 1 - 1452 (-)
Type: CAZyme
Location: 1 - 1452 (-)
Gene ID: HRGMv2_4571_128_2
Type: pfam
Location: 1498 - 3051 (+)
Type: pfam
Location: 1498 - 3051 (+)
Gene ID: HRGMv2_4571_128_3
Type:
Location: 3048 - 3467 (+)
Type:
Location: 3048 - 3467 (+)
Gene ID: HRGMv2_4571_128_4
Type: TC
Location: 3596 - 5365 (+)
Type: TC
Location: 3596 - 5365 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.