Cluster: HRGMv2_4571_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4571
- CGC Family ID: CGCFAM_05413
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4571_74 | HRGMv2_4571_74_4 | 3164 | 5416 | + | GT35 |
| TF | HRGMv2_4571_74 | HRGMv2_4571_74_5 | 5560 | 5925 | + | GntR |
| TC | HRGMv2_4571_74 | HRGMv2_4571_74_6 | 5925 | 6848 | + | 3.A.1.132.6 |
| NULL(UNKNOWN) | HRGMv2_4571_74 | HRGMv2_4571_74_7 | 6826 | 9015 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4571_74 | HRGMv2_4571_74_8 | 9112 | 10749 | - | CBM22 | CE1 |
Gene ID: HRGMv2_4571_74_4
Type: CAZyme
Location: 3164 - 5416 (+)
Type: CAZyme
Location: 3164 - 5416 (+)
Gene ID: HRGMv2_4571_74_5
Type: TF
Location: 5560 - 5925 (+)
Type: TF
Location: 5560 - 5925 (+)
Gene ID: HRGMv2_4571_74_6
Type: TC
Location: 5925 - 6848 (+)
Type: TC
Location: 5925 - 6848 (+)
Gene ID: HRGMv2_4571_74_7
Type:
Location: 6826 - 9015 (+)
Type:
Location: 6826 - 9015 (+)
Gene ID: HRGMv2_4571_74_8
Type: CAZyme
Location: 9112 - 10749 (-)
Type: CAZyme
Location: 9112 - 10749 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.