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Cluster: HRGMv2_4571_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4571_70 HRGMv2_4571_70_2 323 1366 + 3.A.1.11.8
TC HRGMv2_4571_70 HRGMv2_4571_70_3 1369 2175 + 3.A.1.11.8
TC HRGMv2_4571_70 HRGMv2_4571_70_4 2187 2981 + 3.A.1.11.8
TC HRGMv2_4571_70 HRGMv2_4571_70_5 3259 4530 + 3.A.1.11.7
pfam HRGMv2_4571_70 HRGMv2_4571_70_6 4743 5483 + DUF2461
CAZyme HRGMv2_4571_70 HRGMv2_4571_70_7 5821 7707 - GH13_39
pfam HRGMv2_4571_70 HRGMv2_4571_70_8 7789 8148 - 23S_rRNA_IVP
CAZyme HRGMv2_4571_70 HRGMv2_4571_70_9 8303 10708 - GT35
Gene ID: HRGMv2_4571_70_2
Type: TC
Location: 323 - 1366 (+)
Gene ID: HRGMv2_4571_70_3
Type: TC
Location: 1369 - 2175 (+)
Gene ID: HRGMv2_4571_70_4
Type: TC
Location: 2187 - 2981 (+)
Gene ID: HRGMv2_4571_70_5
Type: TC
Location: 3259 - 4530 (+)
Gene ID: HRGMv2_4571_70_6
Type: pfam
Location: 4743 - 5483 (+)
Gene ID: HRGMv2_4571_70_7
Type: CAZyme
Location: 5821 - 7707 (-)
Gene ID: HRGMv2_4571_70_8
Type: pfam
Location: 7789 - 8148 (-)
Gene ID: HRGMv2_4571_70_9
Type: CAZyme
Location: 8303 - 10708 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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