Cluster: HRGMv2_4571_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4571
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4571_63 | HRGMv2_4571_63_3 | 3603 | 6581 | - | CBM22 | CBM6 | CE1 | GH43_29 |
| TC | HRGMv2_4571_63 | HRGMv2_4571_63_4 | 7068 | 9305 | + | 3.A.3.6.10 |
| pfam | HRGMv2_4571_63 | HRGMv2_4571_63_5 | 9295 | 9780 | + | PEMT |
| TC | HRGMv2_4571_63 | HRGMv2_4571_63_6 | 9822 | 10646 | - | 3.A.1.132.3 |
Gene ID: HRGMv2_4571_63_3
Type: CAZyme
Location: 3603 - 6581 (-)
Type: CAZyme
Location: 3603 - 6581 (-)
Gene ID: HRGMv2_4571_63_4
Type: TC
Location: 7068 - 9305 (+)
Type: TC
Location: 7068 - 9305 (+)
Gene ID: HRGMv2_4571_63_5
Type: pfam
Location: 9295 - 9780 (+)
Type: pfam
Location: 9295 - 9780 (+)
Gene ID: HRGMv2_4571_63_6
Type: TC
Location: 9822 - 10646 (-)
Type: TC
Location: 9822 - 10646 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.