Cluster: HRGMv2_4571_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4571
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4571_62 | HRGMv2_4571_62_1 | 417 | 2564 | - | PL35 |
| CAZyme | HRGMv2_4571_62 | HRGMv2_4571_62_2 | 2600 | 5323 | - | CE12 |
| TC | HRGMv2_4571_62 | HRGMv2_4571_62_3 | 5587 | 6336 | + | 3.A.1.105.3 |
Gene ID: HRGMv2_4571_62_1
Type: CAZyme
Location: 417 - 2564 (-)
Type: CAZyme
Location: 417 - 2564 (-)
Gene ID: HRGMv2_4571_62_2
Type: CAZyme
Location: 2600 - 5323 (-)
Type: CAZyme
Location: 2600 - 5323 (-)
Gene ID: HRGMv2_4571_62_3
Type: TC
Location: 5587 - 6336 (+)
Type: TC
Location: 5587 - 6336 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.