Cluster: HRGMv2_4571_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4571
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4571_52 | HRGMv2_4571_52_1 | 1 | 1242 | + | 9.A.8.1.5 |
| NULL(UNKNOWN) | HRGMv2_4571_52 | HRGMv2_4571_52_2 | 1369 | 1782 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4571_52 | HRGMv2_4571_52_3 | 1899 | 3002 | - | DHHW |
| TC | HRGMv2_4571_52 | HRGMv2_4571_52_4 | 3015 | 4409 | - | 2.A.50.2.1 |
| CAZyme | HRGMv2_4571_52 | HRGMv2_4571_52_5 | 4795 | 6336 | + | CBM4 | CBM4 |
Gene ID: HRGMv2_4571_52_1
Type: TC
Location: 1 - 1242 (+)
Type: TC
Location: 1 - 1242 (+)
Gene ID: HRGMv2_4571_52_2
Type:
Location: 1369 - 1782 (+)
Type:
Location: 1369 - 1782 (+)
Gene ID: HRGMv2_4571_52_3
Type: pfam
Location: 1899 - 3002 (-)
Type: pfam
Location: 1899 - 3002 (-)
Gene ID: HRGMv2_4571_52_4
Type: TC
Location: 3015 - 4409 (-)
Type: TC
Location: 3015 - 4409 (-)
Gene ID: HRGMv2_4571_52_5
Type: CAZyme
Location: 4795 - 6336 (+)
Type: CAZyme
Location: 4795 - 6336 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.