Cluster: HRGMv2_4571_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4571
- CGC Family ID: CGCFAM_01591
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4571_5 | HRGMv2_4571_5_4 | 4714 | 5688 | + | 8.A.21.2.2 |
| TC | HRGMv2_4571_5 | HRGMv2_4571_5_5 | 5900 | 7207 | + | 3.A.1.1.11 |
| TC | HRGMv2_4571_5 | HRGMv2_4571_5_6 | 7204 | 8091 | + | 3.A.1.1.11 |
| TC | HRGMv2_4571_5 | HRGMv2_4571_5_7 | 8088 | 8915 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_4571_5 | HRGMv2_4571_5_8 | 8912 | 10021 | + | GH105 |
| TC | HRGMv2_4571_5 | HRGMv2_4571_5_9 | 10190 | 11563 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_4571_5_4
Type: TC
Location: 4714 - 5688 (+)
Type: TC
Location: 4714 - 5688 (+)
Gene ID: HRGMv2_4571_5_5
Type: TC
Location: 5900 - 7207 (+)
Type: TC
Location: 5900 - 7207 (+)
Gene ID: HRGMv2_4571_5_6
Type: TC
Location: 7204 - 8091 (+)
Type: TC
Location: 7204 - 8091 (+)
Gene ID: HRGMv2_4571_5_7
Type: TC
Location: 8088 - 8915 (+)
Type: TC
Location: 8088 - 8915 (+)
Gene ID: HRGMv2_4571_5_8
Type: CAZyme
Location: 8912 - 10021 (+)
Type: CAZyme
Location: 8912 - 10021 (+)
Gene ID: HRGMv2_4571_5_9
Type: TC
Location: 10190 - 11563 (-)
Type: TC
Location: 10190 - 11563 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.