Cluster: HRGMv2_4571_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4571
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4571_47 | HRGMv2_4571_47_1 | 167 | 2644 | - | CBM4 | GH9 |
| pfam | HRGMv2_4571_47 | HRGMv2_4571_47_2 | 3021 | 3566 | - | PAP2 | PAP2_3 |
| pfam | HRGMv2_4571_47 | HRGMv2_4571_47_3 | 3596 | 4810 | - | PFK |
| TC | HRGMv2_4571_47 | HRGMv2_4571_47_4 | 5093 | 7846 | + | 3.A.5.1.3 |
Gene ID: HRGMv2_4571_47_1
Type: CAZyme
Location: 167 - 2644 (-)
Type: CAZyme
Location: 167 - 2644 (-)
Gene ID: HRGMv2_4571_47_2
Type: pfam
Location: 3021 - 3566 (-)
Type: pfam
Location: 3021 - 3566 (-)
Gene ID: HRGMv2_4571_47_3
Type: pfam
Location: 3596 - 4810 (-)
Type: pfam
Location: 3596 - 4810 (-)
Gene ID: HRGMv2_4571_47_4
Type: TC
Location: 5093 - 7846 (+)
Type: TC
Location: 5093 - 7846 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp937880065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.